Resources

• BovReg project website: https://www.bovreg.eu/

• BovReg github repository: https://github.com/BovReg/

• nf-core website: https://nf-co.re/

• nf-core github: https://github.com/nf-core/

• nf-core/atacseq pipeline: https://github.com/nf-core/atacseq

• Nextflow documentation: https://www.nextflow.io/docs/latest/index.html

• Bytesize nf-core series consisting of short talks covering different aspects of nf-core ranging from single pipeline description, different aspects of nf-core development, etc. They are listed on the events size of nf-core with the corresponding Zoom link for upcoming talks and YouTube links for past events: https://nf-co.re/events

• Introduction to Bioinformatics workflows with Nextflow and nf-core Carpentries course: https://carpentries-incubator.github.io/workflows-nextflow/

• Seqera labs Nextflow training: https://training.seqera.io/

• CBCRG Nextflow course for PhDs: https://github.com/cbcrg/nf-phdcourse22

• Current ATAC-seq Standards: https://www.encodeproject.org/atac-seq/#standards